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All Chromosome - Full Data Set - Forward Strand Windows |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
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All Chromosome - Full Data Set - Reverse Strand Windows |
Homo sapiens (Human) |
RNAStructuromeDB |
GRCh38 |
View on JBrowse |
|
ArcTest |
Homo sapiens (Human) |
Test |
Test |
View on JBrowse |
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Clinical SNP Variants |
Homo sapiens (Human) |
NCBI ClinVar dataset |
NCBI |
View on JBrowse |
|
Conservation Score (from 100 vertebrates) |
Homo sapiens (Human) |
phastCons100way |
UCSC |
View on JBrowse |
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DFAM Track |
Homo sapiens (Human) |
UCSC Genome Browser RepeatMasker |
USCS Genome Browser |
View on JBrowse |
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EBV Type 1 Forward Scan Results (GFF3) |
Lymphocryptovirus Human gammaherpesvirus 4 Type 1 (EBV Type 1) |
ScanFold |
EBV Type 1 |
View on JBrowse |
|
Ensembl Annotations (release 91) |
Homo sapiens (Human) |
Ensembl Annotations |
Ensembl |
View on JBrowse |
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Ensemble Diversity - GRCh38 - Forward Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
Ensemble Diversity - GRCh38 - Reverse Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
Ensemble Regulatory Build (Release 91) |
Homo sapiens (Human) |
Ensembl Regulatory Build |
homo_sapiens.GRCh38.Regulatory_Build.regulatory_features.20161111.gff.gz |
View on JBrowse |
|
Ensembl Variation (release 91) |
Homo sapiens (Human) |
Ensembl Variation |
ftp://ftp.ensembl.org/pub/release-91/variation/vcf/homo_sapiens/homo_sapiens.vcf.gz |
View on JBrowse |
|
Frequency of MFE - GRCh38 - Forward Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
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Frequency of MFE - GRCh38 - Reverse Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
LNCIPEDIA Hg38 Long Non-Coding RNA |
Homo sapiens (Human) |
LNCipedia |
LNCipedia.org |
View on JBrowse |
|
MFE |
Lentivirus Human immunodeficiency virus 1 (HIV-1) |
ScanFold-Scan |
ScanFold-Scan |
View on JBrowse |
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Minimum Free Energy - GRCh38 - Forward Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
Minimum Free Energy - GRCh38 - Reverse Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
NCBI Genome Annotations |
Homo sapiens (Human) |
NCBI |
NCBI |
View on JBrowse |
|
P-Values - GRCh38 - Forward Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
P-Values - GRCh38 - Reverse Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
Rfam Bed Track (Version 13) |
Homo sapiens (Human) |
Manual annotations |
Rfam |
View on JBrowse |
|
RNACentral GFF3 Track |
Homo sapiens (Human) |
RNAcentral |
ftp://ftp.ebi.ac.uk/pub/databases/RNAcentral/releases/8.0/genome_coordinates/Homo_sapiens.GRCh38.gff.gz |
View on JBrowse |
|
RSV Gene Annotations |
Orthopneumovirus Human (Respiratory syncytial virus) |
ScanFold |
ScanFold |
View on JBrowse |
|
RSV(+strand; coding strand) MFE |
Orthopneumovirus Human (Respiratory syncytial virus) |
ScanFold |
ScanFold |
View on JBrowse |
|
RSV(+strand) Ensemble Diversity |
Orthopneumovirus Human (Respiratory syncytial virus) |
ScanFold |
ScanFold |
View on JBrowse |
|
RSV(-strand; genomic) MFE |
Orthopneumovirus Human (Respiratory syncytial virus) |
ScanFold |
ScanFold |
View on JBrowse |
|
RSV(+strand) ScanFold-Scan Results |
Orthopneumovirus Human (Respiratory syncytial virus) |
ScanFold |
ScanFold |
View on JBrowse |
|
RSV(-strand) z-score |
Orthopneumovirus Human (Respiratory syncytial virus) |
ScanFold |
ScanFold |
View on JBrowse |
|
RSV(+strand) z-score |
Orthopneumovirus Human (Respiratory syncytial virus) |
ScanFold |
ScanFold |
View on JBrowse |
|
ZIKV Features |
Flavivirus zika virus (Zika Virus) |
RNA Structurome DB |
NCBI NucCore |
View on JBrowse |
|
ZIKV MFE |
Flavivirus zika virus (Zika Virus) |
RNA Structurome DB |
RNA Structurome DB |
View on JBrowse |
|
ZIKV z-score |
Flavivirus zika virus (Zika Virus) |
RNA Structurome DB |
RNA Structurome DB |
View on JBrowse |
|
z-score |
Lentivirus Human immunodeficiency virus 1 (HIV-1) |
ScanFold-Scan |
ScanFold-Scan |
View on JBrowse |
|
Z-score Forward Strand (EBV-2) |
Lymphocryptovirus Human gammaherpesvirus 4 Type 2 (EBV Type 2) |
ScanFold |
EBV Type 2 |
View on JBrowse |
|
Z-score Forward Strand (EBV Type 1) |
Lymphocryptovirus Human gammaherpesvirus 4 Type 1 (EBV Type 1) |
ScanFold |
EBV Type 1 |
View on JBrowse |
|
Z-score Forward Strand (HCMV) |
Cytomegalovirus Human betaherpesvirus 5 (Human Cytomegalovirus) |
ScanFold |
HCMV |
View on JBrowse |
|
Z-score Forward Strand (HHV-6A) |
Roseolovirus Human betaherpesvirus 6A (Human herpesvirus 6) |
ScanFold |
HHV-6A |
View on JBrowse |
|
Z-score Forward Strand (HHV-6B) |
Roseolovirus Human betaherpesvirus 6B (Human herpesvirus 6B) |
ScanFold |
HHV-6B |
View on JBrowse |
|
Z-score Reverse Strand (EBV-2) |
Lymphocryptovirus Human gammaherpesvirus 4 Type 2 (EBV Type 2) |
ScanFold |
EBV-2 |
View on JBrowse |
|
Z-score Reverse Strand (EBV Type 1) |
Lymphocryptovirus Human gammaherpesvirus 4 Type 1 (EBV Type 1) |
ScanFold |
EBV Type 1 |
View on JBrowse |
|
Z-score Reverse Strand (HCMV) |
Cytomegalovirus Human betaherpesvirus 5 (Human Cytomegalovirus) |
ScanFold |
HCMV |
View on JBrowse |
|
Z-score Reverse Strand (HHV-6A) |
Roseolovirus Human betaherpesvirus 6A (Human herpesvirus 6) |
ScanFold |
HHV-6A |
View on JBrowse |
|
Z-score Reverse Strand (HHV-6B) |
Roseolovirus Human betaherpesvirus 6B (Human herpesvirus 6B) |
ScanFold |
HHV-6B |
View on JBrowse |
|
Z-Scores - GRCh38 - Forward Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
|
Z-Scores - GRCh38 - Reverse Strand |
Homo sapiens (Human) |
RNAstructuromeDB |
GRCh38 |
View on JBrowse |
