ENST00000543362.5, ENST00000543362.5 (transcript) Homo sapiens

Feature
Overview
NameENST00000543362.5
Unique NameENST00000543362.5
Typetranscript
OrganismHomo sapiens (Human)
Sequence length832
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12chromosomechr12:7089358..7092430 -
Analyses
This transcript is derived from or has results from the following analyses
Analysis NameDate Performed
FASTA Sequence - Transcripts2017-03-29
FASTA Sequence - Protein Coding Transcripts2017-03-29
Gencode Annotation2017-03-01
Properties
Property NameValue
Gene idENSG00000159403.15
Transcript idENST00000543362.5
Gene typeprotein_coding
Gene nameC1R
Transcript typenonsense_mediated_decay
Transcript nameC1R-012
Level2
Protein idENSP00000446356.1
Transcript support level3
Havana geneOTTHUMG00000168149.6
Havana transcriptOTTHUMT00000398533.1
Relationships

This transcript is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ENSG00000159403.15ENSG00000159403.15Homo sapiensgene


The following polypeptide feature(s) derives from this transcript:

Feature NameUnique NameSpeciesType
ENST00000543362.5ENST00000543362.5-proteinHomo sapienspolypeptide


The following three_prime_UTR feature(s) are a part of this transcript:

Feature NameUnique NameSpeciesType
UTR3:ENST00000543362.5UTR3:ENST00000543362.5Homo sapiensthree_prime_UTR


The following five_prime_UTR feature(s) are a part of this transcript:

Feature NameUnique NameSpeciesType
UTR5:ENST00000543362.5UTR5:ENST00000543362.5Homo sapiensfive_prime_UTR


The following exon feature(s) are a part of this transcript:

Feature NameUnique NameSpeciesType
exon:ENST00000543362.5:5exon:ENST00000543362.5:5Homo sapiensexon
exon:ENST00000543362.5:4exon:ENST00000543362.5:4Homo sapiensexon
exon:ENST00000543362.5:3exon:ENST00000543362.5:3Homo sapiensexon
exon:ENST00000543362.5:2exon:ENST00000543362.5:2Homo sapiensexon
exon:ENST00000543362.5:1exon:ENST00000543362.5:1Homo sapiensexon


The following stop_codon feature(s) are a part of this transcript:

Feature NameUnique NameSpeciesType
stop_codon:ENST00000543362.5stop_codon:ENST00000543362.5Homo sapiensstop_codon


The following start_codon feature(s) are a part of this transcript:

Feature NameUnique NameSpeciesType
start_codon:ENST00000543362.5start_codon:ENST00000543362.5Homo sapiensstart_codon


The following CDS feature(s) are a part of this transcript:

Feature NameUnique NameSpeciesType
CDS:ENST00000543362.5CDS:ENST00000543362.5Homo sapiensCDS


Sequences
The following sequences are available for this feature:

transcript sequence

>ENST00000543362.5 ID=ENST00000543362.5|Name=ENST00000543362.5|organism=Homo sapiens|type=transcript|length=832bp
ACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGTGGCT
CTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTC
CCATCCCTCAGAAGTTATTTGGGGAGGTGACTTCCCCTCTGTTCCCCAAG
CCTTACCCCAACAACTTTGAAACAACCACTGTGATCACAGTCCCCACGGG
ATACAGGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGAGCCTTCTGAAG
GCTGCTTCTATGATTATGTCAAGATCTCTGCTGATAAGAAAAGCCTGGGG
AGGTTCTGTGGGCAACTGGGTTCTCCACTGGGCAACCCCCCGGGAAAGAA
GGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCACACAGACT
TCTCCAACGAGGAGAATGGGACCATCATGTTCTACAAGGGCTTCCTGGCC
TACTACCAAGCTGTGGGTCTCTGGTGAGTGACCTCCCTAAGATCAGAGCC
ACTACTCAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTC
CAGACCTTGATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCC
CAGCCCCAGTGCCAGCACCTGTGTCACAACTACGTTGGAGGCTACTTCTG
TTCCTGCCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGG
CTGAGTGCAGCAGCGAGCTGTACACGGAGGCATCAGGCTACATCTCCAGC
CTGGAGTACCCTCGGTCCTACCCCCCTGACCTGCGCTGCAACTACAGCAT
CCGGGTGGAGCGGGGCCTCACCCTGCACCTCA
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transcript from alignment at chr12:7089358..7092430-

Legend: five_prime_UTRexonstart_codonCDSstop_codonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ENST00000543362.5 ID=ENST00000543362.5|Name=ENST00000543362.5|organism=Homo sapiens|type=transcript|length=3073bp|location=Sequence derived from alignment at chr12:7089358..7092430- (Homo sapiens)
ACGCTGTCGGGAGAGCCCAGGATTCAACACGGGCCTTGAGAAATGTGAGT
AAGGGTGATGGGCAACCAGGTGGGAGGGAGAAGCCAGGGGAGAAGCCAGG
GCATGGGAGGCAATTCAGGGAGACAGGAACACCCTTCTCTCTTCACACAC
CTCATCAGTTCCACTGTGCACACGCGTGGACACACACAACACACGCCCCA
TCCCTCCTCCTAGGGATCAGAGGAGACTTCATACATAGATGCTCATGCCA
TGGTCCTTTCTTCCCTCTGGGCTCTTGGCAGGGAGCAGCGAGAGGAGGGG
ACCCCTTGCCCAGGACGGGACACTCTGTGCCTGTGTCCCCCACTCCACAG
ATGGTTTCTCCCAGACGCTCTTGCTGAACCTGTGGGAGCCCTTTCAGAGA
CCCACGGGTGGAAACCCTCACCCTCCATTAACTGGTCCCAAGCCAGTCCT
ATTCCTGGAAGGGGAGGGGAGGGACGCGTCCGGGCAGGGGAGGAGGCTGG
AAAGGGAGTGTGAGGGGAGTGTGGTGGCCTCTGGACTGGACACTGCCCTG
GAGAGTGACCCGATGCAGCAGCTGCACAGGCCATCCTCCCCACCCACGCA
CCCCTGCTGAGAACATGTCTGTGAGGTTCAGGGTGGGCAGAGAGGAGAAT
GCCCAGTGGTATGGCCGTCTCATCCCCTGCCACAGCCACTGCCCACATGG
CAAGAGTGCTGAACCCCTCCAGCTCCAGATACTCTCTTTTGTTTTGGCAG
GTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCT
CCATTCCCATCCCTCAGAAGTTATTTGGGGAGGTGACTTCCCCTCTGTTC
CCCAAGCCTTACCCCAACAACTTTGAAACAACCACTGTGATCACAGTCCC
CACGGGATACAGGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGAGCCTT
CTGAAGGCTGCTTCTATGATTATGTCAAGGTAGGGGCAGGATGGGCGGGC
AGAGGGGAGACAAAACTGGGCCCTCTGGGATCTGGGATCTGTATGGCATG
CACACCCCCAGACACAGCCCAGCCCCACAAGAGCTGATGGCCAACGGCCT
CTCTGAGAGCCCGGGGATGCCCTGGATGGGCGCTCACTGGTGTAGAGGCC
CTCGGTGAGCACTGAGGGGAGAAGCACAGAGAAGGAAGGGGACAGGACCC
ACTCAGGAAATTCAACATCCACTGAGTCAGGAAAACCTTCCCCATCTGCT
GTCTAGCTGAGAGTCTTTGGGAAACCACTGTGCCTCAGCTTCCCTGTCTC
CAAGGAAATGATTGACATGGCTGCCTGCTTCAACAGGAACACAGGGACAT
GAGGAGGAGAAATGTGGGCTCTGGCAGCACAGGAATAGCCTTCAGCAAGG
ACAGTGTGCTCAGAACCCTCACCTCTGTGGCAACCAAGGGTACCTTCCCA
GGCCTGTCTTTCTCTATCCAGTAAAAATGAGATTCAGGGCTCAAGCAGAG
CCTGCGAAGGTCCAACAACTACCATTCCCAGGAGACCCCTGGAGATTATG
CGTGAATTACATGACAATGGCACGTCTTACCGGCTCAGAAGACTTGGCGA
GTGTGCAGTGTTGGGGGAGGGCGTTTGCTGGCAGAGTCAAGGAGAGGTTG
AGGAGGCTGTGAGGAGGAAGGAAGAGGGACGAGGCAGTGCCTGCTGACAC
TGAGATGGGTGGGCTTCAGGGCTCATGTTCCGCCGAGGGCATCAGGAGGC
ACTCGAGGTGTGAATGGTTTGATTAGGCTGAGGTGGAATCTGAAGACAGA
AAATAAAGCGGAGCTGTCTGAGCTCTGGGAATGAGGGGCAGGTAAAGGCT
GGGTACAGACAACCAGGACCCCAGGGGAACAGGCCATAGGAGGTGGTGGG
GATGGAGAAGGACCTGAAACCTGCCAGAGGAGCAGAAAACAGGGAAAGGG
TGAGGTACCCAGTCCAGGACAACACGCAAAGAGTGAGTCAGTGGGAGACT
CAGGGAACAGCTGAAAGTCACATGGGGAAGTTTGCAGCAGCTGAGCCCAG
CAGGTAGTGACCAGCCAGAGCCATTGTGGTGCATGATGCACTCTGGGCGA
GACAAGGAGGACCATCACTGAGCCACCACGTGCGCCACTCCGCAACAGAT
CTTCTTCCTACCCCCTGTCCTTCTTCCACCAGATCTCTGCTGATAAGAAA
AGCCTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTGGGCAACCCCCC
GGGAAAGAAGGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTCC
ACACAGACTTCTCCAACGAGGAGAATGGGACCATCATGTTCTACAAGGGC
TTCCTGGCCTACTACCAAGCTGTGGGTGAGTAGCCCCCCAGGGATCCCTT
TTCTCTGACCTCAGCCATATTGAATGGGGGGCCAAGAAAGGGAATCTTGA
ATGCAAAGAAGCCGAAAGCCTGGCTTTCCTTGTTCCTCCCCTCGAGAGAG
CTTTTCCTAACGAGGCCTGTCAACCTGGGCTCTGTCCCCATGGAGCAGTC
CCCAGAGAGCATTGGAGAGGCCTGGAGGTCCAGGTGGCCTAAAGATGCCT
TTGTCTTTAGGTCTCTGGTGAGTGACCTCCCTAAGATCAGAGCCACTACT
CAGGTCTCCCAGCAGAAGCTTAACCCTCCTTCCTGAATGCCTTCCAGACC
TTGATGAATGTGCTTCCCGGAGCAAATCAGGGGAGGAGGATCCCCAGCCC
CAGTGCCAGCACCTGTGTCACAACTACGTTGGAGGCTACTTCTGTTCCTG
CCGTCCAGGCTATGAGCTTCAGGAAGACAGGCATTCCTGCCAGGGTGAGC
CAGAGTGGTGTAGCAGAGGGGAAGGGGTTGAGCCAGGGCTTGCTGGGCCA
GCTGGAGTCCCCCGTAATGCCCTGTGGCTCTGCTCTCACAGCTGAGTGCA
GCAGCGAGCTGTACACGGAGGCATCAGGCTACATCTCCAGCCTGGAGTAC
CCTCGGTCCTACCCCCCTGACCTGCGCTGCAACTACAGCATCCGGGTGGA
GCGGGGCCTCACCCTGCACCTCA
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Coding sequence (CDS) from alignment at chr12:7089358..7092430-

>ENST00000543362.5 ID=ENST00000543362.5|Name=ENST00000543362.5|organism=Homo sapiens|type=CDS|length=1740bp|location=Sequence derived from alignment at chr12:7089358..7092430- (Homo sapiens)
GTCTCTGGTGAATCTCTGCTGATAAGAAAAGCCTGGGGAGGTTCTGTGGG
CAACTGGGTTCTCCACTGGGCAACCCCCCGGGAAAGAAGGAATTTATGTC
CCAAGGGAACAAGATGCTGCTGACCTTCCACACAGACTTCTCCAACGAGG
AGAATGGGACCATCATGTTCTACAAGGGCTTCCTGGCCTACTACCAAGCT
GTGGGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGA
GGCTCCATTCCCATCCCTCAGAAGTTATTTGGGGAGGTGACTTCCCCTCT
GTTCCCCAAGCCTTACCCCAACAACTTTGAAACAACCACTGTGATCACAG
TCCCCACGGGATACAGGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGAG
CCTTCTGAAGGCTGCTTCTATGATTATGTCAAGATGTCTCTGGTGAATCT
CTGCTGATAAGAAAAGCCTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCA
CTGGGCAACCCCCCGGGAAAGAAGGAATTTATGTCCCAAGGGAACAAGAT
GCTGCTGACCTTCCACACAGACTTCTCCAACGAGGAGAATGGGACCATCA
TGTTCTACAAGGGCTTCCTGGCCTACTACCAAGCTGTGGGTGGCTCTTGT
ACCTCCTGGTGCCGGCCCTGTTCTGCAGGGCAGGAGGCTCCATTCCCATC
CCTCAGAAGTTATTTGGGGAGGTGACTTCCCCTCTGTTCCCCAAGCCTTA
CCCCAACAACTTTGAAACAACCACTGTGATCACAGTCCCCACGGGATACA
GGGTGAAGCTCGTCTTCCAGCAGTTTGACCTGGAGCCTTCTGAAGGCTGC
TTCTATGATTATGTCAAGATGTCTCTGGTGAATCTCTGCTGATAAGAAAA
GCCTGGGGAGGTTCTGTGGGCAACTGGGTTCTCCACTGGGCAACCCCCCG
GGAAAGAAGGAATTTATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCA
CACAGACTTCTCCAACGAGGAGAATGGGACCATCATGTTCTACAAGGGCT
TCCTGGCCTACTACCAAGCTGTGGGTGGCTCTTGTACCTCCTGGTGCCGG
CCCTGTTCTGCAGGGCAGGAGGCTCCATTCCCATCCCTCAGAAGTTATTT
GGGGAGGTGACTTCCCCTCTGTTCCCCAAGCCTTACCCCAACAACTTTGA
AACAACCACTGTGATCACAGTCCCCACGGGATACAGGGTGAAGCTCGTCT
TCCAGCAGTTTGACCTGGAGCCTTCTGAAGGCTGCTTCTATGATTATGTC
AAGATGTCTCTGGTGAATCTCTGCTGATAAGAAAAGCCTGGGGAGGTTCT
GTGGGCAACTGGGTTCTCCACTGGGCAACCCCCCGGGAAAGAAGGAATTT
ATGTCCCAAGGGAACAAGATGCTGCTGACCTTCCACACAGACTTCTCCAA
CGAGGAGAATGGGACCATCATGTTCTACAAGGGCTTCCTGGCCTACTACC
AAGCTGTGGGTGGCTCTTGTACCTCCTGGTGCCGGCCCTGTTCTGCAGGG
CAGGAGGCTCCATTCCCATCCCTCAGAAGTTATTTGGGGAGGTGACTTCC
CCTCTGTTCCCCAAGCCTTACCCCAACAACTTTGAAACAACCACTGTGAT
CACAGTCCCCACGGGATACAGGGTGAAGCTCGTCTTCCAGCAGTTTGACC
TGGAGCCTTCTGAAGGCTGCTTCTATGATTATGTCAAGAT
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