Downloads

Name Organism Program, Pipeline Name or Method Namesort descending Source Name
Ensembl Annotations (release 91) Homo sapiens (Human) Ensembl Annotations Ensembl View on JBrowse
Ensemble Regulatory Build (Release 91) Homo sapiens (Human) Ensembl Regulatory Build homo_sapiens.GRCh38.Regulatory_Build.regulatory_features.20161111.gff.gz View on JBrowse
Ensembl Variation (release 91) Homo sapiens (Human) Ensembl Variation ftp://ftp.ensembl.org/pub/release-91/variation/vcf/homo_sapiens/homo_sapiens.vcf.gz View on JBrowse
LNCIPEDIA Hg38 Long Non-Coding RNA Homo sapiens (Human) LNCipedia LNCipedia.org View on JBrowse
Rfam Bed Track (Version 13) Homo sapiens (Human) Manual annotations Rfam View on JBrowse
NCBI Genome Annotations Homo sapiens (Human) NCBI NCBI View on JBrowse
Clinical SNP Variants Homo sapiens (Human) NCBI ClinVar dataset NCBI View on JBrowse
Conservation Score (from 100 vertebrates) Homo sapiens (Human) phastCons100way UCSC View on JBrowse
RNACentral GFF3 Track Homo sapiens (Human) RNAcentral ftp://ftp.ebi.ac.uk/pub/databases/RNAcentral/releases/8.0/genome_coordinates/Homo_sapiens.GRCh38.gff.gz View on JBrowse
Frequency of MFE - GRCh38 - Forward Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
All Chromosome - Full Data Set - Forward Strand Windows Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
Minimum Free Energy - GRCh38 - Forward Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
P-Values - GRCh38 - Forward Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
Z-Scores - GRCh38 - Forward Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
Ensemble Diversity - GRCh38 - Forward Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
Frequency of MFE - GRCh38 - Reverse Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
Ensemble Diversity - GRCh38 - Reverse Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
Minimum Free Energy - GRCh38 - Reverse Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
Z-Scores - GRCh38 - Reverse Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
P-Values - GRCh38 - Reverse Strand Homo sapiens (Human) RNAstructuromeDB GRCh38 View on JBrowse
All Chromosome - Full Data Set - Reverse Strand Windows Homo sapiens (Human) RNAStructuromeDB GRCh38 View on JBrowse
ZIKV MFE Flavivirus zika virus (Zika Virus) RNA Structurome DB RNA Structurome DB View on JBrowse
ZIKV z-score Flavivirus zika virus (Zika Virus) RNA Structurome DB RNA Structurome DB View on JBrowse
ZIKV Features Flavivirus zika virus (Zika Virus) RNA Structurome DB NCBI NucCore View on JBrowse
EBV Type 1 Forward Scan Results (GFF3) Lymphocryptovirus Human gammaherpesvirus 4 Type 1 (EBV Type 1) ScanFold EBV Type 1 View on JBrowse
Z-score Reverse Strand (EBV Type 2) Lymphocryptovirus Human gammaherpesvirus 4 Type 2 (EBV Type 2) ScanFold EBV Type 2 View on JBrowse
Z-score Reverse Strand (EBV Type 1) Lymphocryptovirus Human gammaherpesvirus 4 Type 1 (EBV Type 1) ScanFold EBV Type 1 View on JBrowse
Z-score Forward Strand (EBV Type 1) Lymphocryptovirus Human gammaherpesvirus 4 Type 1 (EBV Type 1) ScanFold EBV Type 1 View on JBrowse
RSV(+strand; coding strand) MFE Orthopneumovirus Human (Respiratory syncytial virus) ScanFold ScanFold View on JBrowse
RSV(+strand) z-score Orthopneumovirus Human (Respiratory syncytial virus) ScanFold ScanFold View on JBrowse
RSV Gene Annotations Orthopneumovirus Human (Respiratory syncytial virus) ScanFold ScanFold View on JBrowse
RSV(+strand) Ensemble Diversity Orthopneumovirus Human (Respiratory syncytial virus) ScanFold ScanFold View on JBrowse
RSV(+strand) ScanFold-Scan Results Orthopneumovirus Human (Respiratory syncytial virus) ScanFold ScanFold View on JBrowse
RSV(-strand) z-score Orthopneumovirus Human (Respiratory syncytial virus) ScanFold ScanFold View on JBrowse
RSV(-strand; genomic) MFE Orthopneumovirus Human (Respiratory syncytial virus) ScanFold ScanFold View on JBrowse
Z-score Forward Strand (EBV Type 2) Lymphocryptovirus Human gammaherpesvirus 4 Type 2 (EBV Type 2) ScanFold EBV Type 2 View on JBrowse
z-score Lentivirus Human immunodeficiency virus 1 (HIV-1) ScanFold-Scan ScanFold-Scan View on JBrowse
MFE Lentivirus Human immunodeficiency virus 1 (HIV-1) ScanFold-Scan ScanFold-Scan View on JBrowse
DFAM Track Homo sapiens (Human) UCSC Genome Browser RepeatMasker USCS Genome Browser View on JBrowse